Hyakki Yakoushou
Beyond Twilight

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Both involve people who have a "gift" that enables them to view spirits (not to mention not entirely friendly spiritual "guardians"). Natsume Yuujinchou seems to be a more shoujo variation on the themes of Selected Pandemonium, which is aimed squarely at an adult audience. Both are well worth a look if you like stories about the Japanese view of the supernatural. 

These are probably the best two mature supernatural titles out there. Both have excellent artwork and engaging, if episodic, stories revolving around two men who have a "gift" that gives them a view into unique and mysterious worlds unseen by most people.  

Both are about yokai. Hyakkiyakou Shou is from the perspective of someone who can see the yokai, while Tetsuichi is from the yokai's perspective. 

Both main charactes can see supernatural beings and relates to Japanese folklores. 

Main male character can see supernatural things that other can't.  

Both series are all based on supernatural and main male character had a special power that others didnt. but shinrei tantei yakumo are more on ghost while selected'P are more youkai.