If you liked
Hyouryuu Kyoushitsu
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...then you might like
Eden no Ori
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[*] - Class of students mysteriously disappearing from earth's surface. [*] - On an unknown place with monsters. [*] - Survival manga. Main differences is that Hyouryouu Kyoushitsu has primary school students and they usually stay at one place meanwhile Cage of Eden has highschool students and try to discover the land.
If you liked
Sundome
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...then you might like
Nozoki Ana
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I like to think Nozoki Ana as a lighter version of Sundome , I find both MC characters really similar and in both series MC girl manipulates MC boy , Most of the time ending up in sexual situations.
If you liked
Bakemonogatari
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...then you might like
Yojouhan Shinwa Taikei
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They may be entirely different things , but both provides fast-paced dialogues and sometimes conversation goes really deep. Both focuses on characters more than story itself and have really unique art style. Also both has some mystery in it and romance.
If you liked
Yankee-kun to Megane-chan
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...then you might like
Yamada-kun to 7-nin no Majo
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Same creator , Same stuff. Yankee-kun is more shounen type and has delinquents in setting while Yamada-kun has supernatural elements and interesting plotline but I assure you that both have romance and in both manga MC guy starts off as loners.
If you liked
Rosario to Vampire: Season II
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...then you might like
The Breaker: New Waves
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These two titles have many things in common , Both have MC who's trying to be stronger and fighting so much , till becoming one of the strongest characters in the story. Both are manga that continues where prequel left off and also more serious. One of the biggest differences is that Rosario+Vampire arouses around youkai world while The Breaker is martial arts , so you can expect many epic battles and plot-twists.