Makemagic

A comprehensive watch order of the Yu☆Gi☆Oh! series, which includes every entry of the Yu☆Gi☆Oh! franchise.
Original Guide: https://myanimelist.net/forum/?topicid=1869744

AEGC Interest Stack index: https://myanimelist.net/forum/?topicid=2017008

Just good song alone is *not* enough to qualify - the video part is just as important, if not more.

Originality is valued, so expect some weird shit (in a good way) to be a part of this collection.

Not sorted in any particular order.

Part 1 here: https://myanimelist.net/stacks/6094

All Media Guide.

In all the anime on the list, I recommend watching the Japanese version with original audio, as it does not have any type of censorship and cuts.
The North American versions of these animes, which were later distributed to other countries by 4kids, were severely distorted with cuts, censorship, name changes and soundtrack changes. In the case of Yu-Gi-Oh! GX, an entire season was even cut. That's why I recommend the original Japanese version.

Music videos using stop-motion animation.

Part 2: https://myanimelist.net/stacks/43980
Part 3: https://myanimelist.net/stacks/51619/

Removed after creating this list, since I'm not sure if stop-motion was used, but it's still a nice puppet clip:

https://myanimelist.net/anime/42853/Kotobadori

Cutout animation is a form of stop-motion animation usually made with paper or fabric cutouts. The technique was especially popular in Japanese animation before 1934 because cel animation used to be too expensive. Therefore pioneers of anime such as Noburou Oofuji and Yasuji Murata often used cutouts. Silhouette animation is considered a subgenre with its history going back to shadow plays. It is included in a separate stack.

Silhouette Animation:
https://myanimelist.net/stacks/47002

Collage animation is closely related:
https://myanimelist.net/stacks/21389

Cutout Animation 1:
https://myanimelist.net/stacks/46772

These stacks are meant for cataloguing every stop-motion animation on Myanimelist. The list is the result of research by the Stop-Motion Animation Appreciation Society:

https://myanimelist.net/clubs.php?cid=16200

Stop-motion is a form of animation in which objects are manipulated little by little while each frame is shot separately. Puppet animation is the most common, but before 1935 cutout animation was also very common. Among other types are claymation, pixilation (now removed from the database), object and model animation. In this list also works using sand, charcoal or paint are included, since in the form they've been accepted to MAL, they also include gradual manipulation and shot by shot filming.

Part 1: https://myanimelist.net/stacks/47018
Part 2: https://myanimelist.net/stacks/47020
Part 3: https://myanimelist.net/stacks/47021
Part 4: https://myanimelist.net/stacks/47022
Part 5: https://myanimelist.net/stacks/47023
Part 6: https://myanimelist.net/stacks/47026

Part 8: https://myanimelist.net/stacks/47032
Part 9: https://myanimelist.net/stacks/47034
Part 10: https://myanimelist.net/stacks/47035
Part 11: https://myanimelist.net/stacks/47036
Part 12: https://myanimelist.net/stacks/47038
Part 13: https://myanimelist.net/stacks/49186
Part 14: https://myanimelist.net/stacks/51880